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Recent
publications:
[14] Atomistic Picture for the Folding Pathway of a Hybrid-1 Type Human Telomeric DNA G-quadruplex
Yunqiang Bian, Cheng Tan, Jun Wang, Yuebiao Sheng, Jian Zhang, Wei Wang
PLOS Computational Biology, 2014, DOI: 10.1371/journal.pcbi.1003562
[13] RNA fragment modeling with a nucleobase discrete-state model
Jian Zhang, Yunqiang Bian, Hui Lin, and Wei Wang
PHYSICAL REVIEW E 85, 021909 (2012)
[12] Atomistic analysis of pseudoknotted RNA folding
Yujie Zhang, Jian Zhang, and Wei Wang
J. Am. Chem. Soc. 133, 6882, (2011)
[11] Effectiveness of PHI-value analysis in the binding process of Arc repressor dimer
Xinlu Guo, Jian Zhang, Le Chang, Jun Wang, and Wei Wang
PHYSICAL REVIEW E 84, 011909 (2011)
[10] Constrained proper sampling of conformations of transition state
ensemble of protein folding
Ming Lin, Jian Zhang, Hsiao-Mei Lu, Rong Chen, and Jie Liang
J. Chem. Phys. 134, 075103 (2011); doi: 10.1063/1.3519056
[9] Protein folding simulations: From coarse-grained model to all-atom model.
Jian Zhang, Wenfei Li, Jun Wang, Meng Qin, Lei Wu, Zhiqiang Yan, Weixin Xu, Guanghong Zuo, Wei Wang
IUBMB Life 61: 627 (2009)
[8] Novel mthod for free energy estimation towards prediction of two and three dimensional structures of pseudoknotted RNA molecules
Jian Zhang, Joseph Dundas, Ming Lin, Rong Chen, Wei Wang, Jie Liang.
RNA 15: 2248-2263 (2009)
[7] Discrete state model and accurate estimation of loop entropy of RNA secondary structures.
Jian Zhang, Ming Lin, Rong Chen, Wei Wang, Jie Liang
J. Chem. Phys. 128: 125107 (2008)
[6] All-atom Replica Exchange Molecular Simulation of Protein BBL
Jian Zhang, Wenfei Li, Jun Wang, Meng Qin, Wei Wang
Proteins 72: 1038-1047 (2008)
[5] Metal-Coupled Folding of Cys2His2 Zinc-finger.
Wenfei Li, Jian Zhang, Jun Wang, and Wei Wang
J. Am. Chem. Soc. 130, 892-900, (2008)
[4] Folding of proteins with an all-atom Go-model
L. Wu, J. Zhang, M. Qin, F. Liu, and W. Wang
THE JOURNAL OF CHEMICAL PHYSICS 128, 235103 (2008)
[3] Folding behavior of ribosomal protein S6 studied by modified Go-like model
Lei Wu, Jian Zhang, Jun Wang, Wenfei Li, and Wei Wang.
PHYSICAL REVIEW E 75, 031914 (2007)
[2] Folding mechanism of Trpzip2 β-hairpin studied by all-atom REMD simulations
Jian Zhang, Meng Qin, and Wei Wang.
Proteins 62: 672-685 (2006)
[1] Multiple folding mechanisms of protein ubiquitin
Jian Zhang, Meng Qin, and Wei Wang
Proteins 59: 565-579 (2005)
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